Each of the tracks by itself in <em>encoded</em> - using a <abbrtitle="Coder-Decoder">Codec</abbr>. Common Video-Codecs are h264, mpeg2, mpeg4, theora, mjpeg, wmv3. Audio-Codecs: mp2, mp3, dts, aac, wav/pcm.
Not all codecs can be packed into a given format. For example the 'mpeg' format is limited to mpeg2, mpeg4 and mp3 codecs (not entirely true). DVDs do have stringent limitations as well. The opposite would be .avi; pretty much every audio/video codec can be contained in an .avi file-format.
To make things worse, naming conventions for video codecs and formats are often identical (esp mpeg ones) which leads to confusion.
All in all it is a very wide and deep field. Suffice there are different uses for different codecs and formats.
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<h2>Ardour specific</h2>
<p>
Ardour supports a wide variety of video file-formats and video-codecs. More specifically, ardour actually does not support any video at all but delegates handling of video to <ahref="ffmpeg.org">ffmpeg</a> which supports over 350 different video-codecs and more than 250 file-formats.
When importing a video into ardour, it will be <em>transcoded</em> (transcoding: change from one format and codec to another) to avi/mjpeg for internal use (this allows reliable seeking to frames at low CPU cost - the file-size will increase, but hard-disks are large and fast).
The export dialog includes presets for common format & codec combinations (such as DVD, web-video,..). If in doubt use one of the presets.
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<p>
As last note: Every time a video is transcoded the quality can only get worse. Hence for the final mastering/<abbrtitle="Multiplexing Audio and Video">muxing</abbr> process always to back to the original source of the video.